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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs12216369 chr6:42029271 C/A KRT6B chr12:52840435-52845910:- 1.06 7.55 6.53E-10 Box Plot
ACC rs12264752 chr10:61340313 C/T GAGE2D chrX:49207160-49214420:+ 0.5 8.14 7.77E-11 Box Plot
ACC rs12331836 chr4:180518301 C/T SMAD4 chr18:48554764-48611415:+ -1.84 -7.88 1.97E-10 Box Plot
ACC rs12413173 chr10:48488887 C/T OR5V1 chr6:29323007-29399744:- 0.56 8.3 4.3E-11 Box Plot
ACC rs12439996 chr15:46697681 C/G PRHOXNB chr13:28552243-28562774:- 0.61 7.96 1.49E-10 Box Plot
ACC rs12513776 chr5:71605853 G/C GDPD5 chr11:75145685-75236948:- -0.77 -7.73 3.47E-10 Box Plot
ACC rs12594677 chr15:59994943 T/G PRHOXNB chr13:28552243-28562774:- 0.62 8.3 4.33E-11 Box Plot
ACC rs12614095 chr2:138045611 C/T C2orf57 chr2:232457575-232458994:+ 0.74 7.73 3.37E-10 Box Plot
ACC rs1263790 chr14:21968619 C/T PRAMEF16 chr1:13495254-13498260:+ -0.71 -7.83 2.34E-10 Box Plot
ACC rs12676570 chr8:9823872 G/A PRHOXNB chr13:28552243-28562774:- 0.61 8.02 1.17E-10 Box Plot
ACC rs12676615 chr8:9824110 G/T PRHOXNB chr13:28552243-28562774:- 0.61 8.02 1.17E-10 Box Plot
ACC rs12678115 chr8:90244238 C/T DUPD1 chr10:76797594-76818272:- 0.84 8.83 6.42E-12 Box Plot
ACC rs12702308 chr7:47179276 C/A DRGX chr10:50572226-50604062:- 0.76 7.99 1.34E-10 Box Plot
ACC rs12723603 chr1:26839594 G/A GAGE2D chrX:49207160-49214420:+ 0.68 8.06 1.02E-10 Box Plot
ACC rs12723603 chr1:26839594 G/A TFDP3 chrX:132350697-132352376:- 1.04 10.63 1.2E-14 Box Plot